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ahedd DIH,Cloud-native applications

TYPE
-
REGION
Greece, Attica
LANGUAGE
English, Greek

Design and implementation of systems of interconnected containerized components in Cloud infrastructures. The design follows best practices on cyber-security and on developing efficient, Cloud-native applications. The implementation integrates existing open-source components (both by NCSR-D and third-party) to satisfy the client's data processing requirements.

SERVICE DESCRIPTION

Developing applications for Kubernetes or similar Cloud computing infrastructres is a paradigm shift from convetional application development. We have designed and implemented multiple Cloud applications with demanding requirements: high availability, computationally intensive processing, big data volumes, and cybersecurity. We have implemented these applications by combining our deep understanding of the Cloud ecosystem of technologies and tools (indicatively, Docker, Kubernetes, Kafka, distributed databases, Hadoop, Spark), with our ability to develop the missing software block to create an integrated system. We have also developed in-house tools for collecting, collating, and visualizing operational statistics and computation results. The service offered comprises (a) designing a system that covers the client requirements with maximal re-use of existing technologies and minimizes the need for bespoke software; (b) developing or adapting any custom software necessary, and (c ) configuration and deployment of the system.

PREREQUISITES

Access to Cloud computational resources

CASE EXAMPLES

Kubernetes cluster preferred.

SUCCESS STORY

We have developed the NGS processing platform of the Greek National Network on Precision Medicine on Oncology. The platform orchestrates the execution of demanding bioinformatics pipelines, maintaines versioned reference datasets, inputs, tools, and outputs allowing complete reproducibility of results. We have desing the architecture, implemented "glue" components, as well as multi-tenancy and isolation not natively offered by Kubernetes. We have also exploited Gitlab RBAC and CI/CD as a basis for our approach to maintaining and deploying bioinformatics workflows where experimental executions are isolated from clinical executions.

ADDITIONAL INFORMATION

Can be combined with AI Training & Consulting for data-driven strategy offered by ahedd

LINKS

Our NGS processing platform is used by the Greek National Network on Precision Medicine on Oncology for both clinical practice and medical research.

SERVICE OFFERED BY

MEMBER
ahedd
TYPE
DIH
COUNTRY
Greece

MORE INFORMATION ABOUT THIS SERVICE

Data Controller: INSTITUTO TECNOLÓGICO DE INFORMÁTICA (G96278734)
Purposes and legal basis: We will use your personal data to contact you back and answer your inquiries and provide you with information regarding our activity and in connection with our developments, research and services.
Data recipients: Your personal data will only be shared with the DIH your inquiry or information request may concern.
Rights: Regarding your personal data you have the right to access, rectify, erase, data portability, restrict processing , object, consent withdrawal and to file a complaint before the Supervisory Authority. More info
Exercise of rights: You can exercise the aforementioned rights by sending an e-mail to the e-mail address: dpo@iti.es or by sending a letter to the address Camino de Vera s/n, CPI Edif. 8, Acceso B, 46022 Valencia (Spain).